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1

Organization of (pre-)mRNA metabolism in the cell nucleus

Derick G. Wansink, Roel van Driel, Luitzen de Jong

Journal:

Molecular Biology Reports

Year:

1994

Language:

english

File:

PDF, 1.54 MB

english, 1994

2

A composite filter for low FDR of protein-protein interactions detected by in vivo cross-linking

de Jong, Luitzen, Roseboom, Winfried, Kramer, Gertjan

Journal:

Journal of Proteomics

Year:

2021

File:

PDF, 2.55 MB

2021

3

Ultrastructural localization of active genes in nuclei of A431 cells

Derick G. Wansink, Ody C.M. Sibon, Fons F.M. Cremers, Roel van Driel, Luitzen de Jong

Journal:

Journal of Cellular Biochemistry

Year:

1996

Language:

english

File:

PDF, 1.06 MB

english, 1996

4

hnRNP proteins and B23 are the major proteins of the internal nuclear matrix of HeLa S3 cells

Karin A. Mattern, Bruno M. Humbel, Anton O. Muijsers, Luitzen de Jong, Roel van Driel

Journal:

Journal of Cellular Biochemistry

Year:

1996

Language:

english

File:

PDF, 1.51 MB

english, 1996

5

PML-containing nuclear bodies: Their spatial distribution in relation to other nuclear components

Marjolein A. Grande, Ineke van der Kraan, Bas van Steensel, Wouter Schul, Hugues de Thé, Hans T.M. van der Voort, Luitzen de Jong, Roel van Driel

Journal:

Journal of Cellular Biochemistry

Year:

1996

Language:

english

File:

PDF, 1.23 MB

english, 1996

6

Major internal nuclear matrix proteins are common to different human cell types

Karin A. Mattern, Raymond E.M. van Goethem, Luitzen de Jong, Roel van Driel

Journal:

Journal of Cellular Biochemistry

Year:

1997

Language:

english

File:

PDF, 303 KB

english, 1997

7

Nuclear neighbours: The spatial and functional organization of genes and nuclear domains

Wouter Schul, Luitzen de Jong, Roel van Driel

Journal:

Journal of Cellular Biochemistry

Year:

1998

Language:

english

File:

PDF, 363 KB

english, 1998

8

Coiled bodies are predisposed to a spatial association with genes that contain snoRNA sequences in their introns

Wouter Schul, Bart Adelaar, Roel van Driel, Luitzen de Jong

Journal:

Journal of Cellular Biochemistry

Year:

1999

Language:

english

File:

PDF, 338 KB

english, 1999

9

Mild and Chemoselective Peptide-Bond Cleavage of Peptides and Proteins at Azido Homoalanine

Jaap Willem Back, Olivier David, Gertjan Kramer, Géraldine Masson, Piotr T. Kasper, Leo J. de Koning, Luitzen de Jong, Jan H. van Maarseveen, Chris G. de Koster

Journal:

Angewandte Chemie

Year:

2005

Language:

english

File:

PDF, 249 KB

english, 2005

10

Mild and Chemoselective Peptide-Bond Cleavage of Peptides and Proteins at Azido Homoalanine

Jaap Willem Back, Olivier David, Gertjan Kramer, Géraldine Masson, Piotr T. Kasper, Leo J. de Koning, Luitzen de Jong, Jan H. van Maarseveen, Chris G. de Koster

Journal:

Angewandte Chemie International Edition

Year:

2005

Language:

english

File:

PDF, 250 KB

english, 2005

11

An Aptly Positioned Azido Group in the Spacer of a Protein Cross-Linker for Facile Mapping of Lysines in Close Proximity

Piotr T. Kasper, Jaap Willem Back, Maxime Vitale, Aloysius F. Hartog, Winfried Roseboom, Leo J. de Koning, Jan H. van Maarseveen, Anton O. Muijsers, Chris G. de Koster, Luitzen de Jong

Journal:

Year:

2007

Language:

english

File:

PDF, 363 KB

english, 2007

12

Identification of a 43-kda nuclear antigen associated with proliferation by monoclonal antibody k 112

Jasper J. Quak, Guus Van Dongen, Marie A. E. Koken, Joost G. P. Brakkee, Rik J. Scheper, Alfons J. M. Balm, Luitzen De Jong, Gordon B. Snow, Chris J. L. M. Meijer

Journal:

International Journal of Cancer

Year:

1990

Language:

english

File:

PDF, 868 KB

english, 1990

13

The nucleus: A black box being opened

Roel van Driel, Bruno Humbel, Luitzen de Jong

Journal:

Journal of Cellular Biochemistry

Year:

1991

Language:

english

File:

PDF, 635 KB

english, 1991

14

A new crosslinker for mass spectrometric analysis of the quaternary structure of protein complexes

J.W Back, A.F Hartog, H.L Dekker, Anton O Muijsers, L.J de Koning, Luitzen de Jong

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2001

Language:

english

File:

PDF, 260 KB

english, 2001

15

In vitrosplicing of pre-mRNA containing bromouridine

Derick G. Wansink, Rob L. H. Nelissen, Luitzen de Jong

Journal:

Molecular Biology Reports

Year:

1994

Language:

english

File:

PDF, 597 KB

english, 1994

16

Mass spectrometric quantitation of covalently bound cell wall proteins in Saccharomyces cerevisiae

Qing Yuan Yin, Piet W. J. De Groot, Luitzen De Jong, Frans M. Klis, Chris G. De Koster

Journal:

FEMS Yeast Research

Year:

2007

Language:

english

File:

PDF, 227 KB

english, 2007

17

Computer-assisted mass spectrometric analysis of naturally occurring and artificially introduced cross-links in proteins and protein complexes

Leo J. de Koning, Piotr T. Kasper, Jaap Willem Back, Merel A. Nessen, Frank Vanrobaeys, Jozef Van Beeumen, Ermanno Gherardi, Chris G de Koster, Luitzen de Jong

Journal:

Year:

2006

Language:

english

File:

PDF, 348 KB

english, 2006

18

Stoicheiometry and kinetics of the prolyl 4-hydroxylase partial reaction

Luitzen de Jong, Albertus Kemp

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1984

Language:

english

File:

PDF, 427 KB

english, 1984

19

Photoaffinity labelling of the 2-oxoglutarate binding site of prolyl 4-hydroxylase with 5-azidopyridine-2-carboxylic acid

Anthony de Waal, Aloysius F. Hartog, Luitzen de Jong

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1987

Language:

english

File:

PDF, 340 KB

english, 1987

20

Localisation and quantification of the 2-oxoglutarate binding sites of prolyl 4-hydroxylase by photoaffinity labelling with tritiated 5-azidopyridine-2-carboxylic acid

Anthony de Waal, Aloysius F. Hartog, Luitzen de Jong

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1988

Language:

english

File:

PDF, 483 KB

english, 1988

21

The kinetics of the hydroxylation of procollagen by prolyl 4-hydroxylase. Proposal for a processive mechanism of binding of the dimeric hydroxylating enzyme in relation to the high kcat/Km ratio and a conformational requirement for hydroxylation of -X-Pro-Gly- sequences

Luitzen de Jong, Ineke van der Kraan, Anthony de Waal

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1991

Language:

english

File:

PDF, 690 KB

english, 1991

22

A Subset of Poly(A) Polymerase Is Concentrated at Sites of RNA Synthesis and Is Associated with Domains Enriched in Splicing Factors and Poly(A) RNA

Wouter Schul, Roel van Driel, Luitzen de Jong

Journal:

Experimental Cell Research

Year:

1998

Language:

english

File:

PDF, 966 KB

english, 1998

23

Spatial Organization of Four hnRNP Proteins in Relation to Sites of Transcription, to Nuclear Speckles, and to Each Other in Interphase Nuclei and Nuclear Matrices of HeLa Cells

Karin A. Mattern, Ineke van der Kraan, Wouter Schul, Luitzen de Jong, Roel van Driel

Journal:

Experimental Cell Research

Year:

1999

Language:

english

File:

PDF, 528 KB

english, 1999

24

Heat shock-induced redistribution of a 160-kDa nuclear matrix protein

Arjan de Graaf, Alexandra M.L. Meijne, A.Jos B.M. van Renswoude, Bruno M. Humbel, Paul M.P. van Bergen en Henegouwen, Luitzen de Jong, Roel van Driel, Arie J. Verkleij

Journal:

Experimental Cell Research

Year:

1992

Language:

english

File:

PDF, 14.15 MB

english, 1992

25

Stabilization of the nuclear matrix by disulfide bridges: Identification of matrix polypeptides that form disulfides

Nico Stuurman, Arno Floore, Annemarie Colen, Luitzen de Jong, Roel van Driel

Journal:

Experimental Cell Research

Year:

1992

Language:

english

File:

PDF, 2.94 MB

english, 1992

26

Chemical Cross-linking and Mass Spectrometry for Protein Structural Modeling

Jaap Willem Back, Luitzen de Jong, Anton O. Muijsers, Chris G. de Koster

Journal:

Journal of Molecular Biology

Year:

2003

Language:

english

File:

PDF, 536 KB

english, 2003

27

Chemical pulse-chase labelling: Proteome-wide analysis of protein synthesis and degradation

Gertjan Kramer, JaapWillem Back, Merel Nessen, Michael van der Horst, Luitzen de Jong, Leo de Koning, Jan van Maarseveen, Joost Teixeira de Mattos, Klaas Hellingwerf, Chris de Koster

Journal:

Journal of Biotechnology

Year:

2007

Language:

english

File:

PDF, 58 KB

english, 2007

28

Collagen synthesis in cultured myoblasts and myotubes from patients with Duchenne muscular dystrophy

Luitzen de Jong, Ruud A. Wolterman, Sicco Hillarius, Piet A. Bolhuis

Journal:

Journal of the Neurological Sciences

Year:

1987

Language:

english

File:

PDF, 752 KB

english, 1987

29

Binding of matrix attachment regions to lamin B1

M.E.Eva Ludérus, Arjan de Graaf, Elena Mattia, Jan L. den Blaauwen, Marjolein A. Grande, Luitzen de Jong, Roel van Driel

Journal:

Year:

1992

Language:

english

File:

PDF, 4.02 MB

english, 1992

30

A structure for the yeast prohibitin complex: Structure prediction and evidence from chemical crosslinking and mass spectrometry

Jaap W. Back, Marta Artal Sanz, Luitzen de Jong, Leo J. de Koning, Leo G.J. Nijtmans, Chris G. de Koster, Les A. Grivell, Hans van der Spek, Anton O. Muijsers

Journal:

Protein Science

Year:

2002

Language:

english

File:

PDF, 168 KB

english, 2002

31

Selective Enrichment of Azide-Containing Peptides from Complex Mixtures

Nessen, Merel A., Kramer, Gertjan, Back, JaapWillem, Baskin, Jeremy M., Smeenk, Linde E. J., de Koning, Leo J., van Maarseveen, Jan H., de Jong, Luitzen, Bertozzi, Carolyn R., Hiemstra, Henk, de Koste

Journal:

Journal of Proteome Research

Year:

2009

Language:

english

File:

PDF, 567 KB

english, 2009

32

Isolation of cross-linked peptides by diagonal strong cation exchange chromatography for protein complex topology studies by peptide fragment fingerprinting from large sequence databases

Buncherd, Hansuk, Roseboom, Winfried, Ghavim, Behrad, Du, Weina, de Koning, Leo J., de Koster, Chris G., de Jong, Luitzen

Journal:

Journal of Chromatography A

Year:

2014

Language:

english

File:

PDF, 1.70 MB

english, 2014

33

A gas phase cleavage reaction of cross-linked peptides for protein complex topology studies by peptide fragment fingerprinting from large sequence database

Buncherd, Hansuk, Roseboom, Winfried, de Koning, Leo J., de Koster, Chris G., de Jong, Luitzen

Journal:

Journal of Proteomics

Year:

2014

Language:

english

File:

PDF, 995 KB

english, 2014

34

Fluorescent Labeling of Nascent RNA Reveals Transcription by RNA Polymerase II in Domains Scattered Throughout the Nucleus

Derick G. Wansink, Wouter Schul, Ineke van der Kraan, Bas van Steense, Roel van Driel and Luitzen de Jong

Journal:

The Journal of Cell Biology

Year:

1993

Language:

english

File:

PDF, 2.98 MB

english, 1993

35

Identification of Cross-Linked Peptides for Protein Interaction Studies Using Mass Spectrometry and 18 O Labeling

Back, Jaap Willem, Notenboom, Valerie, de Koning, Leo J., Muijsers, Anton O., Sixma, Titia K., de Koster, Chris G., de Jong, Luitzen

Journal:

Analytical Chemistry

Year:

2002

Language:

english

File:

PDF, 110 KB

english, 2002

36

Photoaffinity labeling of peptide binding sites of prolyl 4-hydroxylase with N-(4-azido-2-nitrophenyl)glycyl-(Pro-Pro-Gly)5

De Waal, Anthony, De Jong, Luitzen, Hartog, Aloysius F., Kemp, Albertus

Journal:

Year:

1985

Language:

english

File:

PDF, 914 KB

english, 1985

37

Processive action of the two peptide binding sites of prolyl 4-hydroxylase in the hydroxylation of procollagen

De Waal, Anthony, De Jong, Luitzen

Journal:

Year:

1988

Language:

english

File:

PDF, 765 KB

english, 1988

38

Phosphorylation of androgen receptor isoforms

WONG, Hao Yun, BURGHOORN, Jan A., van LEEUWEN, Marije, de RUITER, Petra E., SCHIPPERS, Esther, BLOK, Leen J., LI, Ka Wan, DEKKER, Henk L., de JONG, Luitzen, TRAPMAN, Jan, GROOTEGOED, J. Anton, BRINKMA

Journal:

Biochemical Journal

Year:

2004

Language:

english

File:

PDF, 461 KB

english, 2004

39

β-Elimination coupled with strong cation-exchange chromatography for phosphopeptide analysis

Buncherd, Hansuk, Roseboom, Winfried, Chokchaichamnankit, Daranee, Sawangareetrakul, Phannee, Phongdara, Amornrat, Srisomsap, Chantragan, de Jong, Luitzen, Svasti, Jisnuson

Journal:

Rapid Communications in Mass Spectrometry

Year:

2016

Language:

english

File:

PDF, 981 KB

english, 2016

40

In-Culture Cross-Linking of Bacterial Cells Reveals Large-Scale Dynamic Protein–Protein Interactions at the Peptide Level

de Jong, Luitzen, de Koning, Edward A., Roseboom, Winfried, Buncherd, Hansuk, Wanner, Martin J., Dapic, Irena, Jansen, Petra J., van Maarseveen, Jan H., Corthals, Garry L., Lewis, Peter J., Hamoen, Le

Journal:

Journal of Proteome Research

Year:

2017

Language:

english

File:

PDF, 3.80 MB

english, 2017

41

Static and Dynamic Ultrasound Imaging to Visualize the Bladder, Bladder Neck, Urethra, and Pelvic Floor in Children with Daytime Incontinence

Schroeder, Rogier, de Mooij, Keetje, Groen, Luitzen, Dik, Pieter, Kuijper, Caroline, Klijn, Aart, de Jong, Tom

Journal:

Frontiers in Pediatrics

Year:

2017

Language:

english

File:

PDF, 149 KB

english, 2017

42

Open and Laparoscopic Colposuspension in Girls with Refractory Urinary Incontinence

Dobrowolska-Glazar, Barbara Anna, Groen, Luitzen A., Nieuwhof-Leppink, Anka J., Klijn, Aart J., de Jong, Tom P. V. M., Chrzan, Rafal

Journal:

Frontiers in Pediatrics

Year:

2017

Language:

english

File:

PDF, 828 KB

english, 2017

43

Fly-ash as a low-cost material for isolation of phosphoproteins

Thawornpan, Pongsakorn, Thanapongpichat, Supinya, Tun, Aung Win, Phongdara, Amornrat, de Jong, Luitzen, Buncherd, Hansuk

Journal:

Year:

2018

Language:

english

File:

PDF, 3.26 MB

english, 2018

44

Mapping the Contact Sites of the Escherichia coli Division-Initiating Proteins FtsZ and ZapA by BAMG Cross-Linking and Site-Directed Mutagenesis

Roseboom, Winfried, Nazir, Madhvi, Meiresonne, Nils, Mohammadi, Tamimount, Verheul, Jolanda, Buncherd, Hansuk, Bonvin, Alexandre, de Koning, Leo, de Koster, Chris, de Jong, Luitzen, den Blaauwen, Tann

Journal:

International Journal of Molecular Sciences

Year:

2018

Language:

english

File:

PDF, 1.70 MB

english, 2018

45

Mechanistic investigation of phosphoprotein enrichment by fly ash-based chromatography

Thawornpan, Pongsakorn, Jumpathong, Watthanachai, Thanapongpichat, Supinya, de Jong, Luitzen, Phongdara, Amornrat, Buncherd, Hansuk

Journal:

Journal of Chromatography B

Year:

2019

Language:

english

File:

PDF, 771 KB

english, 2019

46

Monitoring of micturition and bladder volumes can replace routine indwelling urinary catheters in children receiving intravenous opioids: a prospective cohort study

de Jong, Anita C., Maaskant, Jolanda M., Groen, Luitzen A., van Woensel, Job B. M.

Journal:

European Journal of Pediatrics

Year:

2020

File:

PDF, 327 KB

2020

47

Magnetic Fraction of Fly Ash as a Low-Cost Magnetic Adsorbent for Selective Capture of Phosphoproteins

Thawornpan, Pongsakorn, Jumpathong, Watthanachai, Thanapongpichat, Supinya, Tansila, Natta, Win Tun, Aung, de Jong, Luitzen, Buncherd, Hansuk

Journal:

Analytical Letters

Year:

2020

File:

PDF, 1.98 MB

2020

48

Isolation of Nucleic Acids Using Fly Ash as a Low-Cost Adsorbent

Thawornpan, Pongsakorn, Thanapongpichat, Supinya, Tun, Aung Win, Jumpathong, Watthanachai, Jong, Luitzen de, Buncherd, Hansuk

Journal:

Analytical Letters

Year:

2020

File:

PDF, 1.64 MB

2020

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